2012 Research Computing Day Agenda: Difference between revisions

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'''AGENDA for UAB 2011 Research Computing Day'''
'''AGENDA for UAB 2012 Research Computing Day'''


September 13, 2011
September 13, 2012


UAB Hill University Center Auditorium
UAB Hill University Center, Alumni Auditorium




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* 9:00-9:05 Welcome & Overview David Shealy, Ph.D, IT Research Computing
* 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing


* 9:05-9:40 Keynote Address, ''Informatics at UAB'' Richard Marchase, Ph.D. Interim President
* 9:05-9:40 Keynote Address:  [[Media:RBM_research_computing_day2_9-13-12_0900_13Sept2012.pdf|Building Capacity in Data Sciences]], Richard Marchase, Ph.D., Interim President
* 9:40-10:10 ''UAB IT 2012 Annual Report'' Doug Rigney, Ph.D. Interim VP, Information Technology
* 9:40-10:10 [[Media:Research_Computing_Day_Doug_Rigney_0940_13Sept2012.pdf|UAB IT 2012 Annual Report]], Doug Rigney, Ph.D., Interim VP Information Technology




* 10:10-10:50 ''Update on UAB Research Computing'' John-Paul Robinson, Bob Cloud, David Shealy, Ph.D.
* 10:10-10:50 [[Media:Rcday2012-itrc-update_1010_13Sept2012.pdf|Update on UAB Research Computing]], John-Paul Robinson, Bob Cloud, David Shealy, Ph.D.


* 10:50-11:10 Break  
* 10:50-11:10 Break  


* 11:10-11:45 ''Using UAB HPC Computing Resources for Next-Generation Sequence Analysis'' Elliot Lefkowitz, Ph.D., Curtis Hendrickson Department of Microbiology
* 11:10-11:45 [[Media:Lefkowitz-UAB_IT_Day_1110_13Sept2012.pdf|Biomedical Infomatics: A Partnership for UAB]], Elliot Lefkowitz, Ph.D., Curtis Hendrickson, Department of Microbiology




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* 12:30-2:00 '''Bioinformatics Session'''  
* 12:30-2:00 '''Bioinformatics Session'''  
** 12:30-12:50  ''Research Computing Across the Tree of Life'' Robert Thacker, Ph.D. Department of Biology
** 12:30-12:50  [[Media:Thacker_UAB_ResCompDay_2012_1230_13Sept2012.pdf|Research Computing Across the Tree of Life]], Robert Thacker, Ph.D., Department of Biology
** 12:50-1:10   ''Using Power Insight for Reaserach at UAB'' James Willig, MD Department of Medicine, Infectious Diseases
** 12:50-1:10 [[Media:A_Clinical_Data_Warehouse_ResearchDay_1250_13Sept2013.pdf|A Clinical Data Warehouse?]] James Willig, MD, Department of Medicine, Infectious Diseases
** 1:10-1:30   ''Computational Challenges in Storage, Analysis and Interpretation of Next-Generation Sequencing Data'' Shouguo Gao, Ph.D., Department of Physics
** 1:10-1:30   [[Media:NexGen_physics_1310_13Sept2012.pdf|Computational Challenges in Storage, Analysis and Interpretation of Next-Generation Sequencing Data]], Shouguo Gao, Ph.D., Department of Physics
** 1:30-1:50  ''Microbiome Analysis" Ranjit Kumar, Ph.D., Center for Clinical & Translational Science
** 1:30-1:50  [[Media:Microbiome Analysis-13sepV2_1330.pdf|Microbiome Analysis]], Ranjit Kumar, Ph.D., Center for Clinical & Translational Science
** 1:50-2:10  ''Detecting Sequence Variation in Genomic Samples'' Curtis Hendrickson, Ph.D., John Osborne Department of Microbiology
** 1:50-2:10  [[Media:UAB_Research_Day_Variant_Detection_NGS_1350_13Sept2012.pdf|Using UAB HPC Computing Resources for Next-Generation Sequence Analysis]] Curtis Hendrickson, Ph.D., John Osborne, Department of Microbiology


* 2:10-2:30 Break  
* 2:10-2:30 Break  




* 2:30-3:35   '''Science & Engineering Applications Session'''
* 2:30-4:10   '''Science & Engineering Applications Session'''
** 2:30-2:50   ''Numerical Investigation of Phase Transition in a Cellular Network and Disease Onset'' Johanna Stamper, Ph.D., Xujing Wang, Ph.D., Serkan Guldal, Department of Physics, Elais Jackson, Computer & Information Sciences
** 2:30-2:50   ''Computational Model to the Simulation of Cardiac Electrical Wave Propagation'', LuFang Zhou, Ph.D., Division, Cardiovascular Disease; Department of Medicine; Department, Biomedical Engineering
** 2:50-3:10    ''Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective'' Peter Lai, Chiquito Crasto, Ph.D. Department of Genetics
** 2:50-3:10    ''Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective,'' Peter Lai, Chiquito Crasto, Ph.D., Department of Genetics
** 3:10-3:30    ''Computational Model to the Simulation of Cardiac Electrical Wave Propagation'' LuFang Zhou, Ph.D. Division, Cardiovascular Disease; Department of Medicine; Department, Biomedical Engineering
** 3:10-3:30    [[Media:Research_Computing_Day_Xujing_Wang_islet_oscillation_1510_13Sept2012_presented.pdf|Numerical Investigation of Phase Transition in a Cellular Network and Disease Onset]], Johanna Stamper, Ph.D., Xujing Wang, Ph.D., Serkan Guldal, Department of Physics, Elais Jackson, Computer & Information Sciences
** 3:30-3:50    ''Neuroimaging Workflow'' Frank Skidmore, MD, Department of Neurology
** 3:30-3:50    [[Media:Neuroimaging_Workflow_IT_Day_1530_13Sept2012.pdf|Increased Efficiency in NeuroImaging Workflow]], Frank Skidmore, MD, Department of Neurology
** 3:50-4:10    ''Exploration of the Microbiota in Inflammatory Diseases'' Matthew Stoll, MD, Department of Pediatric Rheumatology
** 3:50-4:10    [[Media:Stoll_Research_computing_day_1530_13Sept2012.pdf|Exploration of the Microbiota in Inflammatory Diseases]], Matthew Stoll, MD, Department of Pediatric Rheumatology


* 4:10 Closing Remarks & Discussion
* 4:10 Closing Remarks & Discussion

Latest revision as of 14:56, 25 October 2012

AGENDA for UAB 2012 Research Computing Day

September 13, 2012

UAB Hill University Center, Alumni Auditorium


  • 8:15-9:00 Registration & Continental Breakfast


  • 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing


  • 10:50-11:10 Break


  • 11:45-12:30 Lunch


  • 2:10-2:30 Break


  • 4:10 Closing Remarks & Discussion
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