2012 Research Computing Day Agenda: Difference between revisions
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* 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing | * 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing | ||
* 9:05-9:40 Keynote Address: | * 9:05-9:40 Keynote Address: [[Media:RBM_research_computing_day2_9-13-12_0900_13Sept2012.pdf|Building Capacity in Data Sciences]], Richard Marchase, Ph.D., Interim President | ||
* 9:40-10:10 | * 9:40-10:10 [[Media:Research_Computing_Day_Doug_Rigney_0940_13Sept2012.pdf|UAB IT 2012 Annual Report]], Doug Rigney, Ph.D., Interim VP Information Technology | ||
* 10:10-10:50 [[Media:Rcday2012-itrc- | * 10:10-10:50 [[Media:Rcday2012-itrc-update_1010_13Sept2012.pdf|Update on UAB Research Computing]], John-Paul Robinson, Bob Cloud, David Shealy, Ph.D. | ||
* 10:50-11:10 Break | * 10:50-11:10 Break | ||
* 11:10-11:45 [[Media: | * 11:10-11:45 [[Media:Lefkowitz-UAB_IT_Day_1110_13Sept2012.pdf|Biomedical Infomatics: A Partnership for UAB]], Elliot Lefkowitz, Ph.D., Curtis Hendrickson, Department of Microbiology | ||
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* 12:30-2:00 '''Bioinformatics Session''' | * 12:30-2:00 '''Bioinformatics Session''' | ||
** 12:30-12:50 | ** 12:30-12:50 [[Media:Thacker_UAB_ResCompDay_2012_1230_13Sept2012.pdf|Research Computing Across the Tree of Life]], Robert Thacker, Ph.D., Department of Biology | ||
** 12:50-1:10 [[Media:A_Clinical_Data_Warehouse_ResearchDay_1250_13Sept2013.pdf|A Clinical Data Warehouse?]] James Willig, MD, Department of Medicine, Infectious Diseases | ** 12:50-1:10 [[Media:A_Clinical_Data_Warehouse_ResearchDay_1250_13Sept2013.pdf|A Clinical Data Warehouse?]] James Willig, MD, Department of Medicine, Infectious Diseases | ||
** 1:10-1:30 | ** 1:10-1:30 [[Media:NexGen_physics_1310_13Sept2012.pdf|Computational Challenges in Storage, Analysis and Interpretation of Next-Generation Sequencing Data]], Shouguo Gao, Ph.D., Department of Physics | ||
** 1:30-1:50 | ** 1:30-1:50 [[Media:Microbiome Analysis-13sepV2_1330.pdf|Microbiome Analysis]], Ranjit Kumar, Ph.D., Center for Clinical & Translational Science | ||
** 1:50-2:10 | ** 1:50-2:10 [[Media:UAB_Research_Day_Variant_Detection_NGS_1350_13Sept2012.pdf|Using UAB HPC Computing Resources for Next-Generation Sequence Analysis]] Curtis Hendrickson, Ph.D., John Osborne, Department of Microbiology | ||
* 2:10-2:30 Break | * 2:10-2:30 Break | ||
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* 2:30-4:10 '''Science & Engineering Applications Session''' | * 2:30-4:10 '''Science & Engineering Applications Session''' | ||
** 2:30-2:50 | ** 2:30-2:50 ''Computational Model to the Simulation of Cardiac Electrical Wave Propagation'', LuFang Zhou, Ph.D., Division, Cardiovascular Disease; Department of Medicine; Department, Biomedical Engineering | ||
** 2:50-3:10 ''Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective,'' Peter Lai, Chiquito Crasto, Ph.D., Department of Genetics | ** 2:50-3:10 ''Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective,'' Peter Lai, Chiquito Crasto, Ph.D., Department of Genetics | ||
** 3:10-3:30 [[Media: | ** 3:10-3:30 [[Media:Research_Computing_Day_Xujing_Wang_islet_oscillation_1510_13Sept2012_presented.pdf|Numerical Investigation of Phase Transition in a Cellular Network and Disease Onset]], Johanna Stamper, Ph.D., Xujing Wang, Ph.D., Serkan Guldal, Department of Physics, Elais Jackson, Computer & Information Sciences | ||
** 3:30-3:50 [[Media:Neuroimaging_Workflow_IT_Day_1530_13Sept2012.pdf|Increased Efficiency in NeuroImaging Workflow]], Frank Skidmore, MD, Department of Neurology | ** 3:30-3:50 [[Media:Neuroimaging_Workflow_IT_Day_1530_13Sept2012.pdf|Increased Efficiency in NeuroImaging Workflow]], Frank Skidmore, MD, Department of Neurology | ||
** 3:50-4:10 | ** 3:50-4:10 [[Media:Stoll_Research_computing_day_1530_13Sept2012.pdf|Exploration of the Microbiota in Inflammatory Diseases]], Matthew Stoll, MD, Department of Pediatric Rheumatology | ||
* 4:10 Closing Remarks & Discussion | * 4:10 Closing Remarks & Discussion | ||
Latest revision as of 14:56, 25 October 2012
AGENDA for UAB 2012 Research Computing Day
September 13, 2012
UAB Hill University Center, Alumni Auditorium
- 8:15-9:00 Registration & Continental Breakfast
- 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing
- 9:05-9:40 Keynote Address: Building Capacity in Data Sciences, Richard Marchase, Ph.D., Interim President
- 9:40-10:10 UAB IT 2012 Annual Report, Doug Rigney, Ph.D., Interim VP Information Technology
- 10:10-10:50 Update on UAB Research Computing, John-Paul Robinson, Bob Cloud, David Shealy, Ph.D.
- 10:50-11:10 Break
- 11:10-11:45 Biomedical Infomatics: A Partnership for UAB, Elliot Lefkowitz, Ph.D., Curtis Hendrickson, Department of Microbiology
- 11:45-12:30 Lunch
- 12:30-2:00 Bioinformatics Session
- 12:30-12:50 Research Computing Across the Tree of Life, Robert Thacker, Ph.D., Department of Biology
- 12:50-1:10 A Clinical Data Warehouse? James Willig, MD, Department of Medicine, Infectious Diseases
- 1:10-1:30 Computational Challenges in Storage, Analysis and Interpretation of Next-Generation Sequencing Data, Shouguo Gao, Ph.D., Department of Physics
- 1:30-1:50 Microbiome Analysis, Ranjit Kumar, Ph.D., Center for Clinical & Translational Science
- 1:50-2:10 Using UAB HPC Computing Resources for Next-Generation Sequence Analysis Curtis Hendrickson, Ph.D., John Osborne, Department of Microbiology
- 2:10-2:30 Break
- 2:30-4:10 Science & Engineering Applications Session
- 2:30-2:50 Computational Model to the Simulation of Cardiac Electrical Wave Propagation, LuFang Zhou, Ph.D., Division, Cardiovascular Disease; Department of Medicine; Department, Biomedical Engineering
- 2:50-3:10 Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective, Peter Lai, Chiquito Crasto, Ph.D., Department of Genetics
- 3:10-3:30 Numerical Investigation of Phase Transition in a Cellular Network and Disease Onset, Johanna Stamper, Ph.D., Xujing Wang, Ph.D., Serkan Guldal, Department of Physics, Elais Jackson, Computer & Information Sciences
- 3:30-3:50 Increased Efficiency in NeuroImaging Workflow, Frank Skidmore, MD, Department of Neurology
- 3:50-4:10 Exploration of the Microbiota in Inflammatory Diseases, Matthew Stoll, MD, Department of Pediatric Rheumatology
- 4:10 Closing Remarks & Discussion