2012 Research Computing Day Agenda: Difference between revisions

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* 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing
* 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing


* 9:05-9:40 Keynote Address: ''Building Capacity in Data Sciences,'' Richard Marchase, Ph.D., Interim President
* 9:05-9:40 Keynote Address: [[Media:RBM_research_computing_day2_9-13-12_0900_13Sept2012.pdf|Building Capacity in Data Sciences]], Richard Marchase, Ph.D., Interim President
* 9:40-10:10 ''UAB IT 2012 Annual Report,'' Doug Rigney, Ph.D., Interim VP Information Technology
* 9:40-10:10 [[Media:Research_Computing_Day_Doug_Rigney_0940_13Sept2012.pdf|UAB IT 2012 Annual Report]], Doug Rigney, Ph.D., Interim VP Information Technology




* 10:10-10:50 ''Update on UAB Research Computing,'' John-Paul Robinson, Bob Cloud, David Shealy, Ph.D.
* 10:10-10:50 [[Media:Rcday2012-itrc-update_1010_13Sept2012.pdf|Update on UAB Research Computing]], John-Paul Robinson, Bob Cloud, David Shealy, Ph.D.


* 10:50-11:10 Break  
* 10:50-11:10 Break  


* 11:10-11:45 ''Using UAB HPC Computing Resources for Next-Generation Sequence Analysis,'' Elliot Lefkowitz, Ph.D., Curtis Hendrickson, Department of Microbiology
* 11:10-11:45 [[Media:Lefkowitz-UAB_IT_Day_1110_13Sept2012.pdf|Biomedical Infomatics: A Partnership for UAB]], Elliot Lefkowitz, Ph.D., Curtis Hendrickson, Department of Microbiology




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* 12:30-2:00 '''Bioinformatics Session'''  
* 12:30-2:00 '''Bioinformatics Session'''  
** 12:30-12:50  ''Research Computing Across the Tree of Life,'' Robert Thacker, Ph.D., Department of Biology
** 12:30-12:50  [[Media:Thacker_UAB_ResCompDay_2012_1230_13Sept2012.pdf|Research Computing Across the Tree of Life]], Robert Thacker, Ph.D., Department of Biology
** 12:50-1:10  [[Media:A_Clinical_Data_Warehouse_ResearchDay_1250_13Sept2013.pdf|A Clinical Data Warehouse?]] James Willig, MD, Department of Medicine, Infectious Diseases
** 12:50-1:10  [[Media:A_Clinical_Data_Warehouse_ResearchDay_1250_13Sept2013.pdf|A Clinical Data Warehouse?]] James Willig, MD, Department of Medicine, Infectious Diseases
** 1:10-1:30   ''Computational Challenges in Storage, Analysis and Interpretation of Next-Generation Sequencing Data,'' Shouguo Gao, Ph.D., Department of Physics
** 1:10-1:30   [[Media:NexGen_physics_1310_13Sept2012.pdf|Computational Challenges in Storage, Analysis and Interpretation of Next-Generation Sequencing Data]], Shouguo Gao, Ph.D., Department of Physics
** 1:30-1:50  ''Microbiome Analysis,'' Ranjit Kumar, Ph.D., Center for Clinical & Translational Science
** 1:30-1:50  [[Media:Microbiome Analysis-13sepV2_1330.pdf|Microbiome Analysis]], Ranjit Kumar, Ph.D., Center for Clinical & Translational Science
** 1:50-2:10  ''Detecting Sequence Variation in Genomic Samples,'' Curtis Hendrickson, Ph.D., John Osborne, Department of Microbiology
** 1:50-2:10  [[Media:UAB_Research_Day_Variant_Detection_NGS_1350_13Sept2012.pdf|Using UAB HPC Computing Resources for Next-Generation Sequence Analysis]] Curtis Hendrickson, Ph.D., John Osborne, Department of Microbiology


* 2:10-2:30 Break  
* 2:10-2:30 Break  
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* 2:30-4:10    '''Science & Engineering Applications Session'''
* 2:30-4:10    '''Science & Engineering Applications Session'''
** 2:30-2:50   ''Computational Model to the Simulation of Cardiac Electrical Wave Propagation,'' LuFang Zhou, Ph.D., Division, Cardiovascular Disease; Department of Medicine; Department, Biomedical Engineering
** 2:30-2:50   ''Computational Model to the Simulation of Cardiac Electrical Wave Propagation'', LuFang Zhou, Ph.D., Division, Cardiovascular Disease; Department of Medicine; Department, Biomedical Engineering
** 2:50-3:10    ''Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective,'' Peter Lai, Chiquito Crasto, Ph.D., Department of Genetics
** 2:50-3:10    ''Diffusion of Odorants into the Binding Region of the Olfactory Receptor - a Novel Perspective,'' Peter Lai, Chiquito Crasto, Ph.D., Department of Genetics
** 3:10-3:30    ''Numerical Investigation of Phase Transition in a Cellular Network and Disease Onset,'' Johanna Stamper, Ph.D., Xujing Wang, Ph.D., Serkan Guldal, Department of Physics, Elais Jackson, Computer & Information Sciences
** 3:10-3:30    [[Media:Research_Computing_Day_Xujing_Wang_islet_oscillation_1510_13Sept2012_presented.pdf|Numerical Investigation of Phase Transition in a Cellular Network and Disease Onset]], Johanna Stamper, Ph.D., Xujing Wang, Ph.D., Serkan Guldal, Department of Physics, Elais Jackson, Computer & Information Sciences
** 3:30-3:50    [[Media:Neuroimaging_Workflow_IT_Day_13Sept2012.pdf|Increased Efficiency in NeuroImaging Workflow]], Frank Skidmore, MD, Department of Neurology
** 3:30-3:50    [[Media:Neuroimaging_Workflow_IT_Day_1530_13Sept2012.pdf|Increased Efficiency in NeuroImaging Workflow]], Frank Skidmore, MD, Department of Neurology
** 3:50-4:10    ''Exploration of the Microbiota in Inflammatory Diseases,'' Matthew Stoll, MD, Department of Pediatric Rheumatology
** 3:50-4:10    [[Media:Stoll_Research_computing_day_1530_13Sept2012.pdf|Exploration of the Microbiota in Inflammatory Diseases]], Matthew Stoll, MD, Department of Pediatric Rheumatology


* 4:10 Closing Remarks & Discussion
* 4:10 Closing Remarks & Discussion

Latest revision as of 14:56, 25 October 2012

AGENDA for UAB 2012 Research Computing Day

September 13, 2012

UAB Hill University Center, Alumni Auditorium


  • 8:15-9:00 Registration & Continental Breakfast


  • 9:00-9:05 Welcome & Overview: David Shealy, Ph.D, IT Research Computing


  • 10:50-11:10 Break


  • 11:45-12:30 Lunch


  • 2:10-2:30 Break


  • 4:10 Closing Remarks & Discussion
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