User contributions for Ozborn@uab.edu
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14 September 2011
- 22:3522:35, 14 September 2011 diff hist +22 N File:Flagstat.jpg Flag stat on BAM files current
- 21:5321:53, 14 September 2011 diff hist −1 Galaxy DNA-Seq Tutorial →Short read alignment to reference genome using BWA
- 21:5221:52, 14 September 2011 diff hist +26 N File:Bwa run cmv 227r.jpg BWA run of VAC WR CMV 227R current
- 21:3321:33, 14 September 2011 diff hist +31 Galaxy DNA-Seq Tutorial →Short read alignment to reference genome using BWA
- 21:3321:33, 14 September 2011 diff hist +39 N File:Bwa run cmv 21950r.jpg Running BWA on CMV 21950R in UAB Galaxy current
- 21:0821:08, 14 September 2011 diff hist 0 File:Cmv21950r 3 1 original boxplot.jpg uploaded a new version of "File:Cmv21950r 3 1 original boxplot.jpg" current
- 21:0521:05, 14 September 2011 diff hist +38 Galaxy DNA-Seq Tutorial →Assessing the quality of the data
- 21:0421:04, 14 September 2011 diff hist 0 N File:DrawQualityScoreBoxplot.jpg No edit summary
- 20:5920:59, 14 September 2011 diff hist +44 Galaxy DNA-Seq Tutorial →Performing cleanup
- 20:5820:58, 14 September 2011 diff hist +47 N File:Cmv21950r 3 1 trimmed boxplot.jpg CMV 21950R after trimming one base off the end. current
- 20:3320:33, 14 September 2011 diff hist +43 Galaxy DNA-Seq Tutorial Adding pre-trim boxplot
- 20:3220:32, 14 September 2011 diff hist +49 N File:Cmv21950r 3 1 original boxplot.jpg Original boxplot before trimming of Vac WR 21950R
- 20:2720:27, 14 September 2011 diff hist +49 Galaxy DNA-Seq Tutorial Adding computation of qualitys stats
- 20:2520:25, 14 September 2011 diff hist +45 N File:ComputeQualityStatsCMV21950R 3 1.jpg Image of running computation of quality stats current
13 September 2011
- 22:3422:34, 13 September 2011 diff hist +212 Galaxy DNA-Seq Tutorial →Assessing the quality of the data
- 22:3122:31, 13 September 2011 diff hist +48 N File:CMV VAC WR 3 2 base quality.jpg CMV_VAC_WR_3_2 box and whiskers plot from FastQC current
- 22:3022:30, 13 September 2011 diff hist +396 Galaxy DNA-Seq Tutorial →Assessing the quality of the data
- 21:4621:46, 13 September 2011 diff hist +619 Galaxy DNA-Seq Tutorial Formatting data
- 21:3121:31, 13 September 2011 diff hist +70 N File:DataType.jpg Data attributes for a vaccinia virus fastq file from the history pane. current
- 21:2921:29, 13 September 2011 diff hist +362 Galaxy DNA-Seq Tutorial →Linking to data
- 21:2621:26, 13 September 2011 diff hist +66 N File:HistoryPane.jpg What your history pane should look like after linking in the data. current
- 19:3419:34, 13 September 2011 diff hist +437 Galaxy DNA-Seq Tutorial Linking in WR data
- 19:0519:05, 13 September 2011 diff hist +219 UAB Galaxy Workshop Tutorial No edit summary
- 19:0119:01, 13 September 2011 diff hist −48 UAB Galaxy Workshop Tutorial No edit summary
- 18:5718:57, 13 September 2011 diff hist +316 N Galaxy DNA-Seq Tutorial Created page with "= Galaxy DNA-Seq Tutorial = == Linking to data == == Grommin Data == == Assessing the quality of the data == == Performing cleanup == == Short read alignment to referenc..."
- 18:5518:55, 13 September 2011 diff hist −243 UAB Galaxy Workshop Tutorial Moving DNA-Seq and RNA-Seq to their own pages
- 17:5917:59, 13 September 2011 diff hist +123 UAB Galaxy Workshop Tutorial →Getting data into Galaxy: Added links to data uploading, still need cleanup.
- 17:5417:54, 13 September 2011 diff hist +36 UploadLargeData Added image
- 17:5117:51, 13 September 2011 diff hist +57 N File:UploadLinkDataFilesGUI.jpg Picture of linking in directory of files to use in Galaxy current
- 17:4517:45, 13 September 2011 diff hist +265 UAB Galaxy Workshop Tutorial →Getting data into Galaxy
- 17:1217:12, 13 September 2011 diff hist +811 UAB Galaxy Workshop Tutorial →UAB Galaxy DNA-Seq Step-by-Step Tutorial
- 16:4816:48, 13 September 2011 diff hist +19 UAB Galaxy Workshop Tutorial →Overview: Mention workflows
- 16:4416:44, 13 September 2011 diff hist +523 N UAB Galaxy Workshop Tutorial Creation of page
- 16:1216:12, 13 September 2011 diff hist +8 Galaxy Moving tutorials to a separate page
12 September 2011
- 19:5219:52, 12 September 2011 diff hist +406 Galaxy Structure for Tutorial started
8 September 2011
- 16:4716:47, 8 September 2011 diff hist +55 2011 HPC Boot Camp Adding section on logging in and uploading data to galaxy
- 16:2016:20, 8 September 2011 diff hist +9 m Galaxy SRMA mention
- 15:5815:58, 8 September 2011 diff hist 0 m Galaxy Typo
- 15:5715:57, 8 September 2011 diff hist −1,279 Galaxy Major overhaul, added script for updating indices
7 September 2011
- 21:4621:46, 7 September 2011 diff hist +1,817 Galaxy Added bash script
25 August 2011
- 21:3421:34, 25 August 2011 diff hist +549 Galaxy →Adding Novel Datasets
- 21:3021:30, 25 August 2011 diff hist +1,229 Galaxy →Adding Novel Datasets
- 21:1621:16, 25 August 2011 diff hist +15 Galaxy →Adding Novel Datasets
- 21:1121:11, 25 August 2011 diff hist +136 Galaxy →Adding Novel Datasets
- 21:0721:07, 25 August 2011 diff hist +701 Galaxy →Datasets
- 18:0718:07, 25 August 2011 diff hist +212 Galaxy →BWA Indices
- 18:0218:02, 25 August 2011 diff hist +2 Galaxy →Sam and FAIDX indices
- 18:0218:02, 25 August 2011 diff hist +36 Galaxy →BWA Indices
- 18:0118:01, 25 August 2011 diff hist +178 Galaxy →Datasets
- 17:5617:56, 25 August 2011 diff hist +1,121 Galaxy →Datasets