User contributions for Curtish@uab.edu
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7 March 2013
- 20:5920:59, 7 March 2013 diff hist +4,961 Galaxy add available-genomes list from galaxy data-cache
- 20:3020:30, 7 March 2013 diff hist −4,236 Galaxy →Galaxy@UAB: add list of available genomes, update and abbreviate software list
- 19:3719:37, 7 March 2013 diff hist −2,092 UploadLargeData removed page. Left links to other related pages. It was redundent. current
- 19:2819:28, 7 March 2013 diff hist +152 Galaxy →Overview
9 January 2013
- 22:5022:50, 9 January 2013 diff hist 0 IgvFromComputeNode →Install/Start X on Desktop
- 22:5022:50, 9 January 2013 diff hist +4 IgvFromComputeNode →Install/Start X on Desktop
- 12:0212:02, 9 January 2013 diff hist +103 NgsCctsBuildVicuna →Vicuna
- 08:2108:21, 9 January 2013 diff hist +57 NgsCctsBuildVicuna →NCBI toolkit 7.0.0
- 08:1708:17, 9 January 2013 diff hist +49 NgsCctsBuildVicuna →NCBI toolkit 7.0.0
- 08:1708:17, 9 January 2013 diff hist +312 NgsCctsBuildVicuna →Vicuna
- 07:4207:42, 9 January 2013 diff hist +15 NgsCctsBuildVicuna →NCBI toolkit 7.0.0
- 05:5305:53, 9 January 2013 diff hist −6 NgsCctsBuildVicuna →NCBI toolkit 7.0.0
- 05:5305:53, 9 January 2013 diff hist +985 N NgsCctsBuildVicuna Created page with "= Build/Install Broad's Vicuna = == pre-requisites == === NCBI toolkit 7.0.0 === # download cd /share/apps/ngs-ccts/downloads wget ftp://ftp.ncbi.nih.gov/toolbox/ncbi..."
18 December 2012
- 20:1920:19, 18 December 2012 diff hist +657 PublicDatasetsNgs No edit summary current
20 November 2012
- 21:4821:48, 20 November 2012 diff hist +530 N PublicDatasetsNgsDbNcbiTaxonomy Created page with "download and build files with a modified galaxy script. # populates /lustre/project/public_datasets/ngs/databases/ncbi_taxonomy /home/curtish/galaxy/scripts/taxonomy/uab_..." current
12 November 2012
5 November 2012
- 16:3916:39, 5 November 2012 diff hist +317 NgsCcts →Short Read Aligners
31 October 2012
- 16:4816:48, 31 October 2012 diff hist +195 NgsCcts →in process
30 October 2012
- 21:5321:53, 30 October 2012 diff hist +34 NgsCcts →Short Read (denovo) Assemblers
- 21:4921:49, 30 October 2012 diff hist +244 NgsCcts →Short Read (denovo) Assemblers
25 October 2012
- 18:2218:22, 25 October 2012 diff hist −1 PublicDatasetsNgs →Directory Structure
- 18:2118:21, 25 October 2012 diff hist −1 PublicDatasetsNgs →Public Genomes and indexes for NGS
- 18:2018:20, 25 October 2012 diff hist −1 PublicDatasetsNgs →Notes on what CCTS BMI wants to populate
- 18:1918:19, 25 October 2012 diff hist +544 PublicDatasetsNgs →Notes on what CCTS BMI wants to populate
9 October 2012
- 22:0922:09, 9 October 2012 diff hist −23 NgsCctsBuildBwa →Building BWA for /share/apps/ngs-ccts current
- 22:0822:08, 9 October 2012 diff hist +2 NgsCcts →Short Read Aligners
- 22:0722:07, 9 October 2012 diff hist +69 NgsCcts →Short Read (denovo) Assemblers
- 22:0522:05, 9 October 2012 diff hist +6 NgsCctsBuildAbyss No edit summary
- 22:0422:04, 9 October 2012 diff hist +119 NgsCctsBuildAbyss No edit summary
- 22:0322:03, 9 October 2012 diff hist +13 NgsCctsBuildAbyss No edit summary
- 21:5821:58, 9 October 2012 diff hist +58 NgsCctsBuildAbyss No edit summary
- 21:5721:57, 9 October 2012 diff hist +96 NgsCctsBuildAbyss No edit summary
- 21:5221:52, 9 October 2012 diff hist +928 N NgsCctsBuildAbyss Created page with " Based on [file:///share/apps/ngs-ccts/abyss-1.3.4/README.html#compilingabyssfromsource README.html:compiling from source] Requires [sparsehash] TARGET_VER=sparsehash-2.0.2..."
- 21:1821:18, 9 October 2012 diff hist +229 NgsCcts →Short Read (denovo) Assemblers
- 21:1621:16, 9 October 2012 diff hist −5 NgsCcts →Short Read Aligners
- 21:1521:15, 9 October 2012 diff hist −3 NgsCcts →Short Read Aligners
- 21:1521:15, 9 October 2012 diff hist −6 NgsCcts →Short Read (denovo) Assemblers
- 21:1521:15, 9 October 2012 diff hist +111 NgsCcts →Short Read (denovo) Assemblers
- 21:0321:03, 9 October 2012 diff hist +277 N NgsCctsBuildVelvet Created page with " TARGET_VER=velvet_1.2.08 wget http://www.ebi.ac.uk/~zerbino/velvet/${TARGET_VER}.tgz tar xzvf ${TARGET_VER}.tgz rm ${TARGET_VER}.tgz cd ${TARGET_VER} Edit Makefile to c..."
- 20:5220:52, 9 October 2012 diff hist +29 N NgsCctsBuildBwa build Curtish@uab.edu moved page NgsCctsBuildBwa build to NgsCctsBuildBwa current
- 20:5220:52, 9 October 2012 diff hist 0 m NgsCctsBuildBwa Curtish@uab.edu moved page NgsCctsBuildBwa build to NgsCctsBuildBwa
- 20:4720:47, 9 October 2012 diff hist +393 N NgsCctsBuildBwa Created page with "= Building BWA for /share/apps/ngs-ccts = Downloading and building BWA BWA_VER=bwa-0.6.2 wget http://downloads.sourceforge.net/project/bio-bwa/${BWA_VER}.tar.bz2?r=http%3A..."
- 20:4120:41, 9 October 2012 diff hist +2 NgsCcts →Short Read Aligners
- 20:4020:40, 9 October 2012 diff hist +221 NgsCcts →Short Read Aligners
- 20:3520:35, 9 October 2012 diff hist +6 NgsCcts →Short Read Aligners
- 20:3420:34, 9 October 2012 diff hist +20 NgsCcts →Alignment Visualization
- 20:3320:33, 9 October 2012 diff hist +554 NgsCcts No edit summary