User contributions for Curtish@uab.edu
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3 October 2012
- 15:3515:35, 3 October 2012 diff hist +179 PublicDatasetsNgs →Notes on what CCTS BMI wants to populate
2 October 2012
- 18:5818:58, 2 October 2012 diff hist +412 PublicDatasetsNgs →Notes on what CCTS BMI wants to populate
- 18:4918:49, 2 October 2012 diff hist +283 PublicDatasetsNgs →Notes on what CCTS BMI wants to populate
- 18:2118:21, 2 October 2012 diff hist +32 PublicDatasetsNgs →Directory Structure
- 18:2018:20, 2 October 2012 diff hist +31 N NgsGenomes Curtish@uab.edu moved page NgsGenomes to PublicDatasetsNgs: creating a sub-page of PublicDatasets current
- 18:2018:20, 2 October 2012 diff hist 0 m PublicDatasetsNgs Curtish@uab.edu moved page NgsGenomes to PublicDatasetsNgs: creating a sub-page of PublicDatasets
1 October 2012
- 18:1318:13, 1 October 2012 diff hist +2,402 N PublicDatasetsNgs Created page with "= Public Genomes and indexes for NGS = CCTS BMI in conjunection with anyone who wishes to participate, maintains a public directory of genomic sequences and indexes built fro..."
12 September 2012
- 04:2904:29, 12 September 2012 diff hist +52 IgvFromComputeNode →Remote display from compute node
- 04:2304:23, 12 September 2012 diff hist +176 IgvFromComputeNode →Remote display from compute node
- 04:1004:10, 12 September 2012 diff hist +654 N IgvFromComputeNode Created page with "= Remote display from compute node = Example program: IGV # Install & Launch X-Win on your desktop machine * Windows: X-Win32 from [http://www.uab.edu/it/software UAB IT]] ..."
- 03:3903:39, 12 September 2012 diff hist +343 NgsCcts →Shared CCTS NGS apps
7 September 2012
- 15:5215:52, 7 September 2012 diff hist +113 N NgsCcts Created page with "= Shared CCTS NGS apps = This page documents apps installed by the CCTS BMI group in cheaha:/share/apps/ngs-ccts"
29 February 2012
- 21:0821:08, 29 February 2012 diff hist +212 Cheaha Add physical node grid to Hardware section
13 February 2012
26 January 2012
- 18:2518:25, 26 January 2012 diff hist +59 Galaxy →FASTA File
- 18:2318:23, 26 January 2012 diff hist +87 Galaxy →Introduction
19 December 2011
- 22:2722:27, 19 December 2011 diff hist +538 GalaxyFilterCommonSnps No edit summary current
- 22:0422:04, 19 December 2011 diff hist +2,269 N GalaxyFilterCommonSnps Created page with "Protocol for Filtering common SNPs from a set of alignments Galaxy supports set operations on single columns. Thus, I build an index column for each sample formated as "chr:pos:..."
13 December 2011
- 21:5621:56, 13 December 2011 diff hist +43 Galaxy →Configuration File Update
- 20:5620:56, 13 December 2011 diff hist +79 Galaxy →Index Creation
30 November 2011
- 22:1122:11, 30 November 2011 diff hist −959 Galaxy →Configuration File Update
- 22:0722:07, 30 November 2011 diff hist +5 Galaxy →Index Creation
- 22:0722:07, 30 November 2011 diff hist −1,733 Galaxy →Index Creation
4 November 2011
- 20:5620:56, 4 November 2011 diff hist +105 GalaxyAddTool →pre-requisits current
- 20:2620:26, 4 November 2011 diff hist +45 GalaxyAddTool →Creating a command-wrapper by hand
- 20:1420:14, 4 November 2011 diff hist +34 GalaxyAddTool →Creating a command-wrapper by hand
- 20:1220:12, 4 November 2011 diff hist +76 GalaxyAddTool →Creating a command-wrapper by hand
- 20:1120:11, 4 November 2011 diff hist +466 GalaxyAddTool →Creating a command-wrapper by hand
- 19:5119:51, 4 November 2011 diff hist +221 GalaxyAddTool →Creating a command-wrapper by hand
2 November 2011
- 20:5420:54, 2 November 2011 diff hist +77 GalaxyAddTool No edit summary
- 20:5120:51, 2 November 2011 diff hist +9 GalaxyAddTool →pre-requisits
- 20:5020:50, 2 November 2011 diff hist +683 GalaxyAddTool No edit summary
- 20:2420:24, 2 November 2011 diff hist +507 N GalaxyAddTool start
1 November 2011
- 17:5317:53, 1 November 2011 diff hist +6 Intermine →Web Resources
- 17:5317:53, 1 November 2011 diff hist +560 N Intermine Created page with "== Motivation == CCTS/BMI group plans to establish an Intermine server at UAB in order to support genomics (and other -omic) reseach. The tool provides a way to link datasets w..."
16 September 2011
- 14:5514:55, 16 September 2011 diff hist +501 UAB Galaxy RNA Seq Step by Step Tutorial →Track and Assemble Transcripts with CuffCompare current
- 10:1610:16, 16 September 2011 diff hist 0 N File:Transcript control vs drugged with fold.pdf.png No edit summary current
- 10:0910:09, 16 September 2011 diff hist 0 N File:Transcript control vs drugged with fold.pdf No edit summary current
- 09:3809:38, 16 September 2011 diff hist +5 UAB Galaxy RNA Seq Step by Step Tutorial →extracting the data you want
- 09:3709:37, 16 September 2011 diff hist +4,335 UAB Galaxy RNA Seq Step by Step Tutorial →Fold Change Between Conditions: CuffDiff
- 08:3708:37, 16 September 2011 diff hist −5 UAB Galaxy RNA Seq Step by Step Tutorial →cuffcompare inputs
- 08:3608:36, 16 September 2011 diff hist +85 UAB Galaxy RNA Seq Step by Step Tutorial →cuffcompare inputs
- 08:3408:34, 16 September 2011 diff hist +550 UAB Galaxy RNA Seq Step by Step Tutorial →Track and Assemble Transcripts with CuffCompare
- 08:2808:28, 16 September 2011 diff hist −2 UAB Galaxy RNA Seq Step by Step Tutorial →Track and Assemble Transcripts with CuffCompare =
- 08:2508:25, 16 September 2011 diff hist +331 Welcome add Galaxy box
- 08:2008:20, 16 September 2011 diff hist +148 Projects →Collaboration
- 08:1808:18, 16 September 2011 diff hist +203 Galaxy DNA-Seq Tutorial →Galaxy DNA-Seq Tutorial
- 08:1508:15, 16 September 2011 diff hist +1 UAB Galaxy Workshop Tutorial →Getting Started Tutorial current
- 08:1508:15, 16 September 2011 diff hist +1 UAB Galaxy Workshop Tutorial →Galaxy DNA-Seq Tutorial
- 08:1108:11, 16 September 2011 diff hist +5 UAB Galaxy Workshop Tutorial →Getting Started Tutorial