VisualBrainCore

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Attention: Research Computing Documentation has Moved
https://docs.rc.uab.edu/


Please use the new documentation url https://docs.rc.uab.edu/ for all Research Computing documentation needs.


As a result of this move, we have deprecated use of this wiki for documentation. We are providing read-only access to the content to facilitate migration of bookmarks and to serve as an historical record. All content updates should be made at the new documentation site. The original wiki will not receive further updates.

Thank you,

The Research Computing Team

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Visual Brain Core Mission

Our mission is to help produce high quality, cutting edge research examining the visual brain. To achieve this, we will help investigators overcome some common barriers to performing high quality vision research, and provide forums to discuss new ideas and research techniques.

The 5 aims of the Visual Brain Core

Visual Brain Core Poster

Information For Visual Brain Core

Visual Brain Core Personnel and Office Hours

  • Demet Gurler, PhD: Consultation on experimental design and data analysis issues.
  • Ravi Tripathi, MS: Computer Systems Specialist. Consultation on high performance computing and algorithm issues.
    • Office Hours: Monday, 10:00 am -2:00 pm, Lister Hill Library 4th Floor (Edge of Chaos, The Cafe).
    • ""Thursday, 9:00 am-12:00 pm, Civitan International Research Center, Room 235C

Visual Brain Core Seminar Series

Every first Friday, 3:30 PM in CIRC 120. We will discuss new ideas and techniques in brain imaging.

List of speakers in Visual Brain Core Seminar Series

For Use in Grant Proposals:

The Visual Brain Core must be eventually supported by users. For this reason, we ask that you include use of the Visual Brain Core resources in the budget of your upcoming grants. Quotations from previous proposals are provided in this link.

VBC Mailing List:

To subscribe to the VBC mailing list, click here (and send the email without any changes) or send an email to sympa@vo.uabgrid.uab.edu with the following text in the body of the email subscribe vbc

Other information

Neuroimaging at UAB

UAB Neuroimaging Facilities

Civitan Functional Neuroimaging Laboratory

UAB-HSF MEG Laboratory

Small Animal Imaging Shared Facility

Equipment for collecting behavioral data during Neuroimaging


Neuroimaging and Systems Neuroscience Labs at UAB

(UAB folks, please let us know if your lab should be included on this list!)

Cluster Computing Environment at UAB: Cheaha

  • Cheaha_GettingStarted - information on getting an account and learning about how to use the cluster
  • Cheaha - background information on the cluster useful for grants and publications

UAB-Auburn University Collaboration for Neuroimaging

Auburn University MRI Research Center Siemens Magnetom 7T

UAB & Auburn Neuroimaging Journal Club

  • Neuroimaging journal Club. Every other Friday at noon, second floor CIRC. Contact Adrienne Lahti to get on the mailing list alahti at uab.edu

UAB & Auburn Neuroimaging Retreat

Photos

How To...

Computer and coding related how-to's

Using Linux

Matlab

Psychtoolbox

Coding Help

[Saving Data in Box]

fMRI related how-to's and important links

General Information

Tools

Brain atlases

Cool Websites for Beginners

fMRI statistics

UAB Neuroimaging Tools and How-To's (requires blazer id)

Imaging Protocols

Analysis Scripts

Behavioral data analysis techniques

Institutional Review Board

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