User contributions
(Latest | Earliest) View (newer 100 | older 100) (20 | 50 | 100 | 250 | 500)
- 20:52, 10 April 2018 (diff | hist) . . (+675) . . Box.com bulk transfer (add .netrc info)
- 14:21, 14 September 2017 (diff | hist) . . (+42) . . m Dmtcp Checkpointing (add keyword checkpoint) (top)
- 14:17, 14 September 2017 (diff | hist) . . (+33) . . N Dmtcp (Curtish@uab.edu moved page Dmtcp to Dmtcp Checkpointing: make this page searchable under the keyword checkpoint) (top)
- 14:17, 14 September 2017 (diff | hist) . . (0) . . m Dmtcp Checkpointing (Curtish@uab.edu moved page Dmtcp to Dmtcp Checkpointing: make this page searchable under the keyword checkpoint)
- 15:11, 17 February 2017 (diff | hist) . . (+38) . . Dmtcp Checkpointing (add module load)
- 11:56, 7 February 2017 (diff | hist) . . (+85) . . m Dmtcp Checkpointing
- 11:46, 7 February 2017 (diff | hist) . . (+10) . . m Dmtcp Checkpointing (add link to slurm page)
- 11:43, 7 February 2017 (diff | hist) . . (+225) . . N Dmtcp Checkpointing (created based on discussion with Thomas Anthony)
- 14:56, 11 March 2016 (diff | hist) . . (+28) . . Slurm (→20160311 Mike H)
- 14:56, 11 March 2016 (diff | hist) . . (+1,063) . . Slurm (updates - graphical interactive works)
- 11:28, 25 February 2016 (diff | hist) . . (+88) . . Box.com bulk transfer (→Warning: time stamps)
- 11:22, 25 February 2016 (diff | hist) . . (+128) . . Box.com bulk transfer (→Warning: size limitations: raise to 15G)
- 15:25, 18 February 2016 (diff | hist) . . (+116) . . Box.com bulk transfer (→scripted lftp)
- 13:29, 20 January 2016 (diff | hist) . . (+75) . . Slurm (→Interactive Session)
- 11:47, 15 January 2016 (diff | hist) . . (+715) . . Box.com bulk transfer (→lftp mirror -R example)
- 16:29, 16 December 2015 (diff | hist) . . (+341) . . Box.com bulk transfer (→lftp mirror -R example)
- 13:28, 16 December 2015 (diff | hist) . . (+813) . . Box.com bulk transfer
- 12:30, 16 December 2015 (diff | hist) . . (+846) . . Box.com bulk transfer
- 17:10, 15 December 2015 (diff | hist) . . (+151) . . Box.com bulk transfer (→Warning: time stamps)
- 15:18, 15 December 2015 (diff | hist) . . (+173) . . Box.com bulk transfer (→Warning: size limitations)
- 13:52, 15 December 2015 (diff | hist) . . (+194) . . Box.com bulk transfer (→Warning: size limitations)
- 13:47, 15 December 2015 (diff | hist) . . (+21) . . Box.com bulk transfer (→Warning: size limitations)
- 15:49, 7 December 2015 (diff | hist) . . (+1,023) . . N Box.com bulk transfer (start list of FTP programs to push data to box.com)
- 12:19, 29 July 2015 (diff | hist) . . (+587) . . Cheaha (→Hardware: - updates form the email on 4/13/2015 entitled "[hpc-announce] Adding HPC capacity to Cheaha")
- 11:22, 20 March 2014 (diff | hist) . . (+140) . . IgvFromComputeNode (top)
- 11:19, 20 March 2014 (diff | hist) . . (+114) . . IgvFromComputeNode (→ssh -X to cheaha)
- 15:14, 25 February 2014 (diff | hist) . . (+63) . . N UptimeRobot (Created page with "Used for uptime testing by http://uptimerobot.com Hello World!") (top)
- 13:56, 24 February 2014 (diff | hist) . . (+46) . . NgsCctsVcflib (→Build details) (top)
- 13:55, 24 February 2014 (diff | hist) . . (+1) . . NgsCctsVcflib (→To use)
- 13:55, 24 February 2014 (diff | hist) . . (-2) . . NgsCctsVcflib (→To use)
- 13:55, 24 February 2014 (diff | hist) . . (+12) . . NgsCctsVcflib (→To use)
- 13:54, 24 February 2014 (diff | hist) . . (-6) . . NgsCctsVcflib
- 13:53, 24 February 2014 (diff | hist) . . (+847) . . N NgsCctsVcflib (Created page with "= vcflib = https://github.com/ekg/vcflib this project does not have release or tags. It was originally installed to have access to the vcfallelicprimitives referenced in (...")
- 13:19, 24 February 2014 (diff | hist) . . (-30) . . NgsCcts (→Variant Handling) (top)
- 13:17, 24 February 2014 (diff | hist) . . (+124) . . NgsCcts (→Pairwise Sequence Alignment)
- 22:53, 29 August 2013 (diff | hist) . . (+2) . . NgsCctsBuildCompleteGenomics (→1.5.0 (2013-08-29)) (top)
- 22:53, 29 August 2013 (diff | hist) . . (+549) . . NgsCctsBuildCompleteGenomics
- 22:47, 29 August 2013 (diff | hist) . . (+16) . . NgsCctsBuildCompleteGenomics (→download reference genomes from CG)
- 22:22, 29 August 2013 (diff | hist) . . (+142) . . NgsCctsBuildCompleteGenomics (→download reference genomes from CG)
- 15:47, 29 August 2013 (diff | hist) . . (+23) . . NgsCctsBuildCompleteGenomics (→download reference genomes from CG)
- 15:46, 29 August 2013 (diff | hist) . . (+47) . . NgsCctsBuildCompleteGenomics (→1.7.1 (2013-08-29))
- 15:45, 29 August 2013 (diff | hist) . . (+891) . . N NgsCctsBuildCompleteGenomics (Created page with "= Binary install of Complete Genomics Analysis Tools = Source http://sourceforge.net/projects/cgatools/files/ == 1.7.1 (2013-08-29) == {{{ cd /share/apps/ngs-ccts/download...")
- 12:35, 16 July 2013 (diff | hist) . . (+11) . . IgvFromComputeNode (→Get a compute node)
- 10:17, 12 June 2013 (diff | hist) . . (+422) . . Cheaha (→Hardware)
- 16:28, 16 May 2013 (diff | hist) . . (-799) . . NgsCctsBuildVicuna (→V_FAT) (top)
- 16:23, 16 May 2013 (diff | hist) . . (+896) . . NgsCctsBuildVicuna (→V_FAT)
- 14:09, 16 May 2013 (diff | hist) . . (+177) . . NgsCctsBuildVicuna (→V_FAT)
- 13:57, 16 May 2013 (diff | hist) . . (+2,075) . . NgsCctsBuildVicuna (→V_FAT)
- 10:14, 4 April 2013 (diff | hist) . . (+385) . . NgsCctsBuildVelvet
- 02:53, 28 March 2013 (diff | hist) . . (+459) . . NgsCctsBuildVicuna (→Note: pre-built exe for Linux 64bit!)
- 02:39, 28 March 2013 (diff | hist) . . (+7) . . NgsCctsBuildVicuna (→Vicuna)
- 02:39, 28 March 2013 (diff | hist) . . (+65) . . m NgsCctsBuildVicuna (→Note: pre-built exe for Linux 64bit!)
- 02:38, 28 March 2013 (diff | hist) . . (-24) . . m NgsCctsBuildVicuna (→Vicuna)
- 02:38, 28 March 2013 (diff | hist) . . (-62) . . NgsCctsBuildVicuna (→NCBI toolkit 7.0.0)
- 22:54, 27 March 2013 (diff | hist) . . (+25) . . m NgsCcts (→in process)
- 10:52, 26 March 2013 (diff | hist) . . (+121) . . NgsCcts (→Gene Prediction)
- 10:50, 26 March 2013 (diff | hist) . . (+588) . . N NgsCctsGeneWise (add GeneWise2.2.0 for VICUNA support) (top)
- 10:42, 26 March 2013 (diff | hist) . . (+147) . . NgsCcts (→in process)
- 10:28, 26 March 2013 (diff | hist) . . (+187) . . NgsCctsBuildMosaik (→Build MOSAIK from Source) (top)
- 10:24, 26 March 2013 (diff | hist) . . (+41) . . NgsCcts (→Short Read Aligners)
- 10:14, 26 March 2013 (diff | hist) . . (+24) . . NgsCctsBuildMosaik (→Build MOSAIK from Source)
- 10:14, 26 March 2013 (diff | hist) . . (+362) . . N NgsCctsBuildMosaik (Created page with "= Build MOSAIK from Source = {{ cd /share/apps/ngs-ccts wget https://mosaik-aligner.googlecode.com/files/MOSAIK-2.1.73-source.tar echo "3bb0e83e64b8a102a038a263916022f231e1bb...")
- 10:07, 26 March 2013 (diff | hist) . . (+9) . . m NgsCcts (→Short Read Aligners)
- 10:07, 26 March 2013 (diff | hist) . . (+164) . . NgsCcts (→Short Read Aligners)
- 12:42, 15 March 2013 (diff | hist) . . (+157) . . NgsCcts (→SNP analysis)
- 12:37, 15 March 2013 (diff | hist) . . (+4) . . m NgsCcts (→SNP analysis)
- 12:33, 15 March 2013 (diff | hist) . . (+447) . . NgsCcts (→Short Read (denovo) Assemblers)
- 13:43, 14 March 2013 (diff | hist) . . (+356) . . GBS722 2013 (→Denovo Protocol (2x)) (top)
- 13:41, 14 March 2013 (diff | hist) . . (+113) . . GBS722 2013 (→Ref-based Protocol)
- 13:38, 14 March 2013 (diff | hist) . . (+79) . . GBS722 2013 (→Ref-based Protocol)
- 13:27, 14 March 2013 (diff | hist) . . (+79) . . GBS722 2013 (→Denovo Protocol (2x))
- 13:23, 14 March 2013 (diff | hist) . . (+20) . . GBS722 2013 (→Denovo Protocol (2x))
- 13:21, 14 March 2013 (diff | hist) . . (+6) . . GBS722 2013 (→Denovo Protocol (2x))
- 13:15, 14 March 2013 (diff | hist) . . (+131) . . GBS722 2013 (→Ref-based Protocol)
- 13:14, 14 March 2013 (diff | hist) . . (+73) . . GBS722 2013 (→Ref-based Protocol)
- 12:56, 14 March 2013 (diff | hist) . . (-4) . . GBS722 2013 (→Ref-based Protocol)
- 12:55, 14 March 2013 (diff | hist) . . (+51) . . GBS722 2013 (→Ref-based Protocol)
- 12:54, 14 March 2013 (diff | hist) . . (+11) . . GBS722 2013 (→Ref-based Protocol)
- 12:53, 14 March 2013 (diff | hist) . . (+19) . . GBS722 2013 (→Ref-based Protocol)
- 12:52, 14 March 2013 (diff | hist) . . (+31) . . GBS722 2013 (→Ref-based Protocol)
- 12:42, 14 March 2013 (diff | hist) . . (0) . . GBS722 2013 (→IGV Setup)
- 12:38, 14 March 2013 (diff | hist) . . (+2,392) . . N GBS722 2013 (Created page with "= VACV-WR WT vs DRUG protocol in Galaxy = This is an abbreviated protocol cheat-sheet to help students through the class exercises. ==Links== UAB Galaxy - https://galaxy.ua...")
- 14:04, 11 March 2013 (diff | hist) . . (-49) . . Galaxy File Uploads (remove chmod warning for importfs)
- 13:56, 11 March 2013 (diff | hist) . . (+82) . . Galaxy File Uploads (add warning about permissions.)
- 13:12, 11 March 2013 (diff | hist) . . (+49) . . Galaxy (→Galaxy@UAB)
- 13:11, 11 March 2013 (diff | hist) . . (+212) . . Galaxy (→Installed Genome Indexes: added additional genomes hg16 hg17 mm8 mm7 mm6 mm5, mostly for liftOver support.)
- 13:05, 11 March 2013 (diff | hist) . . (+2) . . m Galaxy (→Overview)
- 13:04, 11 March 2013 (diff | hist) . . (+78) . . Galaxy Importfs (→Copying data to Cheaha using scp: winSCP link)
- 13:01, 11 March 2013 (diff | hist) . . (+255) . . Galaxy File Uploads (added section headers, link to WinSCP, fixed wikipedia link for SCP)
- 12:53, 11 March 2013 (diff | hist) . . (+170) . . Galaxy File Uploads (turn number list to table to add list of drawbacks/limits)
- 16:10, 7 March 2013 (diff | hist) . . (+20) . . Galaxy (→Available Tools)
- 16:08, 7 March 2013 (diff | hist) . . (+374) . . Galaxy (→Organisms)
- 16:08, 7 March 2013 (diff | hist) . . (+570) . . Galaxy (→microbes)
- 15:59, 7 March 2013 (diff | hist) . . (+4,961) . . Galaxy (add available-genomes list from galaxy data-cache)
- 15:30, 7 March 2013 (diff | hist) . . (-4,236) . . Galaxy (→Galaxy@UAB: add list of available genomes, update and abbreviate software list)
- 14:37, 7 March 2013 (diff | hist) . . (-2,092) . . UploadLargeData (removed page. Left links to other related pages. It was redundent.) (top)
- 14:28, 7 March 2013 (diff | hist) . . (+152) . . Galaxy (→Overview)
- 17:50, 9 January 2013 (diff | hist) . . (0) . . IgvFromComputeNode (→Install/Start X on Desktop)
- 17:50, 9 January 2013 (diff | hist) . . (+4) . . IgvFromComputeNode (→Install/Start X on Desktop)
- 07:02, 9 January 2013 (diff | hist) . . (+103) . . NgsCctsBuildVicuna (→Vicuna)
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