User contributions for Curtish@uab.edu
Jump to navigation
Jump to search
29 August 2013
- 20:4620:46, 29 August 2013 diff hist +47 NgsCctsBuildCompleteGenomics →1.7.1 (2013-08-29)
- 20:4520:45, 29 August 2013 diff hist +891 N NgsCctsBuildCompleteGenomics Created page with "= Binary install of Complete Genomics Analysis Tools = Source http://sourceforge.net/projects/cgatools/files/ == 1.7.1 (2013-08-29) == {{{ cd /share/apps/ngs-ccts/download..."
16 July 2013
12 June 2013
- 15:1715:17, 12 June 2013 diff hist +422 Cheaha →Hardware
16 May 2013
- 21:2821:28, 16 May 2013 diff hist −799 NgsCctsBuildVicuna →V_FAT current
- 21:2321:23, 16 May 2013 diff hist +896 NgsCctsBuildVicuna →V_FAT
- 19:0919:09, 16 May 2013 diff hist +177 NgsCctsBuildVicuna →V_FAT
- 18:5718:57, 16 May 2013 diff hist +2,075 NgsCctsBuildVicuna →V_FAT
4 April 2013
- 15:1415:14, 4 April 2013 diff hist +385 NgsCctsBuildVelvet No edit summary
28 March 2013
- 07:5307:53, 28 March 2013 diff hist +459 NgsCctsBuildVicuna →Note: pre-built exe for Linux 64bit!
- 07:3907:39, 28 March 2013 diff hist +7 NgsCctsBuildVicuna →Vicuna
- 07:3907:39, 28 March 2013 diff hist +65 m NgsCctsBuildVicuna →Note: pre-built exe for Linux 64bit!
- 07:3807:38, 28 March 2013 diff hist −24 m NgsCctsBuildVicuna →Vicuna
- 07:3807:38, 28 March 2013 diff hist −62 NgsCctsBuildVicuna →NCBI toolkit 7.0.0
- 03:5403:54, 28 March 2013 diff hist +25 m NgsCcts →in process
26 March 2013
- 15:5215:52, 26 March 2013 diff hist +121 NgsCcts →Gene Prediction
- 15:5015:50, 26 March 2013 diff hist +588 N NgsCctsGeneWise add GeneWise2.2.0 for VICUNA support current
- 15:4215:42, 26 March 2013 diff hist +147 NgsCcts →in process
- 15:2815:28, 26 March 2013 diff hist +187 NgsCctsBuildMosaik →Build MOSAIK from Source current
- 15:2415:24, 26 March 2013 diff hist +41 NgsCcts →Short Read Aligners
- 15:1415:14, 26 March 2013 diff hist +24 NgsCctsBuildMosaik →Build MOSAIK from Source
- 15:1415:14, 26 March 2013 diff hist +362 N NgsCctsBuildMosaik Created page with "= Build MOSAIK from Source = {{ cd /share/apps/ngs-ccts wget https://mosaik-aligner.googlecode.com/files/MOSAIK-2.1.73-source.tar echo "3bb0e83e64b8a102a038a263916022f231e1bb..."
- 15:0715:07, 26 March 2013 diff hist +9 m NgsCcts →Short Read Aligners
- 15:0715:07, 26 March 2013 diff hist +164 NgsCcts →Short Read Aligners
15 March 2013
- 17:4217:42, 15 March 2013 diff hist +157 NgsCcts →SNP analysis
- 17:3717:37, 15 March 2013 diff hist +4 m NgsCcts →SNP analysis
- 17:3317:33, 15 March 2013 diff hist +447 NgsCcts →Short Read (denovo) Assemblers
14 March 2013
- 18:4318:43, 14 March 2013 diff hist +356 GBS722 2013 →Denovo Protocol (2x) current
- 18:4118:41, 14 March 2013 diff hist +113 GBS722 2013 →Ref-based Protocol
- 18:3818:38, 14 March 2013 diff hist +79 GBS722 2013 →Ref-based Protocol
- 18:2718:27, 14 March 2013 diff hist +79 GBS722 2013 →Denovo Protocol (2x)
- 18:2318:23, 14 March 2013 diff hist +20 GBS722 2013 →Denovo Protocol (2x)
- 18:2118:21, 14 March 2013 diff hist +6 GBS722 2013 →Denovo Protocol (2x)
- 18:1518:15, 14 March 2013 diff hist +131 GBS722 2013 →Ref-based Protocol
- 18:1418:14, 14 March 2013 diff hist +73 GBS722 2013 →Ref-based Protocol
- 17:5617:56, 14 March 2013 diff hist −4 GBS722 2013 →Ref-based Protocol
- 17:5517:55, 14 March 2013 diff hist +51 GBS722 2013 →Ref-based Protocol
- 17:5417:54, 14 March 2013 diff hist +11 GBS722 2013 →Ref-based Protocol
- 17:5317:53, 14 March 2013 diff hist +19 GBS722 2013 →Ref-based Protocol
- 17:5217:52, 14 March 2013 diff hist +31 GBS722 2013 →Ref-based Protocol
- 17:4217:42, 14 March 2013 diff hist 0 GBS722 2013 →IGV Setup
- 17:3817:38, 14 March 2013 diff hist +2,392 N GBS722 2013 Created page with "= VACV-WR WT vs DRUG protocol in Galaxy = This is an abbreviated protocol cheat-sheet to help students through the class exercises. ==Links== UAB Galaxy - https://galaxy.ua..."
11 March 2013
- 19:0419:04, 11 March 2013 diff hist −49 Galaxy File Uploads remove chmod warning for importfs
- 18:5618:56, 11 March 2013 diff hist +82 Galaxy File Uploads add warning about permissions.
- 18:1218:12, 11 March 2013 diff hist +49 Galaxy →Galaxy@UAB
- 18:1118:11, 11 March 2013 diff hist +212 Galaxy →Installed Genome Indexes: added additional genomes hg16 hg17 mm8 mm7 mm6 mm5, mostly for liftOver support.
- 18:0518:05, 11 March 2013 diff hist +2 m Galaxy →Overview
- 18:0418:04, 11 March 2013 diff hist +78 Galaxy Importfs →Copying data to Cheaha using scp: winSCP link
- 18:0118:01, 11 March 2013 diff hist +255 Galaxy File Uploads added section headers, link to WinSCP, fixed wikipedia link for SCP
- 17:5317:53, 11 March 2013 diff hist +170 Galaxy File Uploads turn number list to table to add list of drawbacks/limits