PublicDatasetsNgsDbNcbiTaxonomy: Difference between revisions
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(Created page with "download and build files with a modified galaxy script. # populates /lustre/project/public_datasets/ngs/databases/ncbi_taxonomy /home/curtish/galaxy/scripts/taxonomy/uab_...") |
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Latest revision as of 21:48, 20 November 2012
download and build files with a modified galaxy script.
# populates /lustre/project/public_datasets/ngs/databases/ncbi_taxonomy /home/curtish/galaxy/scripts/taxonomy/uab_processTaxonomy.sh
put symlinks into galaxy/git
cd /home/curtish/galaxy/scripts/taxonomy/ ln -s /lustre/project/public_datasets/ngs/databases/ncbi_taxonomy/gi_taxid_sorted.txt . ln -s /lustre/project/public_datasets/ngs/databases/ncbi_taxonomy/nodes.dmp . ln -s /lustre/project/public_datasets/ngs/databases/ncbi_taxonomy/names.cleaned.dmp names.dmp