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Attention: Research Computing Documentation has Moved

Please use the new documentation url for all Research Computing documentation needs.

As a result of this move, we have deprecated use of this wiki for documentation. We are providing read-only access to the content to facilitate migration of bookmarks and to serve as an historical record. All content updates should be made at the new documentation site. The original wiki will not receive further updates.

Thank you,

The Research Computing Team


this project does not have release or tags.

It was originally installed to have access to the vcfallelicprimitives referenced in (Zook et al 2014) "Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls"

Version 20140224

To use

module load ngs-ccts/vcflib/20140224

Build details

{{{ mkdir -p /share/apps/ngs-ccts/vcflib/20140224 git clone --recursive git:// cd vcflib

  1. get latest gcc (older, default version failed to compile in fsom/ -see

module load gcc/4.8.1


  1. create module file
  2. it adds $VER_DIR/vcflib/bin to PATH

mkdir /share/apps/ngs-ccts/modulefiles/vcflib vi /share/apps/ngs-ccts/modulefiles/vcflib/20142024