NgsCctsBuildMosaik

From Cheaha
Revision as of 15:28, 26 March 2013 by Curtish@uab.edu (talk | contribs) (→‎Build MOSAIK from Source)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.


Attention: Research Computing Documentation has Moved
https://docs.rc.uab.edu/


Please use the new documentation url https://docs.rc.uab.edu/ for all Research Computing documentation needs.


As a result of this move, we have deprecated use of this wiki for documentation. We are providing read-only access to the content to facilitate migration of bookmarks and to serve as an historical record. All content updates should be made at the new documentation site. The original wiki will not receive further updates.

Thank you,

The Research Computing Team

Back to NgsCcts

Build MOSAIK from Source

 cd /share/apps/ngs-ccts
 wget https://mosaik-aligner.googlecode.com/files/MOSAIK-2.1.73-source.tar
 echo "3bb0e83e64b8a102a038a263916022f231e1bb03  MOSAIK-2.1.73-source.tar" | sha1sum -c -
 tar xvf MOSAIK-2.1.73-source.tar
 rm MOSAIK-2.1.73-source.tar
 cd MOSAIK-2.1.73-source
 # fix paths in makefile before building!
 sed -i.orig -e 's|_DIR = \.\./|_DIR = ./|' Makefile
 make
 cd ../latest
 ln -sf ../MOSAIK-2.1.73-source MOSAIK-2

Quickstart instructions: https://github.com/wanpinglee/MOSAIK/wiki/QuickStart