NgsCctsBuildBwa

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Building BWA for /share/apps/ngs-ccts

Downloading and building BWA

BWA_VER=bwa-0.6.2
wget http://downloads.sourceforge.net/project/bio-bwa/${BWA_VER}.tar.bz2?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Fbio-bwa%2Ffiles%2F&ts=1349814953&use_mirror=iweb
tar jxvf ${BWA_VER}.tar.bz2
rm ${BWA_VER}.tar*
cd ${BWA_VER}
make
cd ..
ln -s `pwd`/${BWA_VER} latest/bwa
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