NgsCcts

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(Alignment Visualization)
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== Alignment Visualization ==
 
== Alignment Visualization ==
* [http://www.broadinstitute.org/software/igv/download IGV] [http://www.broadinstitute.org/igv/projects/downloads/igvtools_2.1.7.zip 2.1.23]
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* [http://www.broadinstitute.org/software/igv/download IGV]
* [http://www.broadinstitute.org/software/igv/download igvtools] [http://www.broadinstitute.org/igv/projects/downloads/igvtools_2.1.7.zip 2.1.7]
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** [http://www.broadinstitute.org/igv/projects/downloads/igvtools_2.1.7.zip IGV 2.1.23]
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* [http://www.broadinstitute.org/software/igv/download igvtools]  
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** [http://www.broadinstitute.org/igv/projects/downloads/igvtools_2.1.7.zip IGVtools 2.1.7]
  
 
== Short Read Aligners ==
 
== Short Read Aligners ==

Revision as of 15:34, 9 October 2012

Contents

Shared CCTS NGS apps

This page documents apps installed by the CCTS BMI group in cheaha:/share/apps/ngs-ccts

Links to latest versions of each package are in /share/apps/ngs-ccts/latest.

See also PublicDatasetsNgs for genomes, indices and databases

Microbiome

Alignment Visualization

Short Read Aligners

Short Read (denovo) Assemblers

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