JAGS: Difference between revisions
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[[wikipedia:Just_another_Gibbs_sampler| Just another Gibbs sampler (JAGS)]] is a program for analysis of Bayesian hierarchical models using Markov chain Monte Carlo (MCMC) developed by Martyn Plummer. Its modeling abilities are similar to WinBUGS/OpenBUGS through the use of a dialect of the same modeling language (informally, BUGS), but it provides no GUI for model building and MCMC samples postprocessing, which must therefore be treated in a separate program (for example calling JAGS from R through a library such as rjags and post-processing MCMC output in R). | |||
Click [http://streaming.stat.iastate.edu/wiki/index.php/JAGS_Guide here] for a good description of JAGS and how it differs from BUGS. | Click [http://streaming.stat.iastate.edu/wiki/index.php/JAGS_Guide here] for a good description of JAGS and how it differs from BUGS. | ||
'''Project website:''' http://mcmc-jags.sourceforge.net/ | |||
====Load SGE module==== | |||
The JAGS environment module can be loaded as follows | The JAGS environment module can be loaded as follows | ||
<pre> | <pre> | ||
module load jags/jags-1.0-gnu | module load jags/jags-1.0-gnu | ||
</pre> | </pre> | ||
[[Category:Software]][[Category:Bio-statistics]] | |||
Latest revision as of 15:15, 4 April 2012
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Just another Gibbs sampler (JAGS) is a program for analysis of Bayesian hierarchical models using Markov chain Monte Carlo (MCMC) developed by Martyn Plummer. Its modeling abilities are similar to WinBUGS/OpenBUGS through the use of a dialect of the same modeling language (informally, BUGS), but it provides no GUI for model building and MCMC samples postprocessing, which must therefore be treated in a separate program (for example calling JAGS from R through a library such as rjags and post-processing MCMC output in R).
Click here for a good description of JAGS and how it differs from BUGS.
Project website: http://mcmc-jags.sourceforge.net/
Load SGE module
The JAGS environment module can be loaded as follows
module load jags/jags-1.0-gnu