Data Movement

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Attention: Research Computing Documentation has Moved
https://docs.rc.uab.edu/


Please use the new documentation url https://docs.rc.uab.edu/ for all Research Computing documentation needs.


As a result of this move, we have deprecated use of this wiki for documentation. We are providing read-only access to the content to facilitate migration of bookmarks and to serve as an historical record. All content updates should be made at the new documentation site. The original wiki will not receive further updates.

Thank you,

The Research Computing Team

There are various tools which you can utilize to help you move data within the HPC cluster, such as mv, cp, scp etc. One of the most powerful tools for data movement on Linux is rsync, which we'll be using in our example scripts below.

Procedure

rr

Job Scripts

If the data that you are moving is large, then you should always use an interactive session or a job script for your data movement. This ensures that the process for your data movement isn't occupying login nodes for a long time, and instead is performing these operations on a compute node.

Interactive session

Job Script