R-packages
Revision as of 19:17, 14 January 2013 by Rkumar@uab.edu (talk | contribs) (Created page with " == R-packages - A central location for external R packages. == The path for dicrectory is ''''''/share/apps/ngs-ccts/R_packages/'''''' Example for installing a package nam...")
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R-packages - A central location for external R packages.
The path for dicrectory is '/share/apps/ngs-ccts/R_packages/'
Example for installing a package named "HMP"
module load R/R-2.15.0 # load an appropriate R module
export R_LIBS=/share/apps/ngs-ccts/R_packages/ #export a environment variable which have the path for R library
R #launch R
install.packages("HMP") #to install library HMP
library("HMP") #to load library HMP
Example for using a library HMP (if already installed)
module load R/R-2.15.0 # load an appropriate R module
export R_LIBS=/share/apps/ngs-ccts/R_packages/ #export a environment variable which have the path for R library
Inside R
library("HMP") #to load library HMP