S.A.G.E.
https://docs.rc.uab.edu/
Please use the new documentation url https://docs.rc.uab.edu/ for all Research Computing documentation needs.
As a result of this move, we have deprecated use of this wiki for documentation. We are providing read-only access to the content to facilitate migration of bookmarks and to serve as an historical record. All content updates should be made at the new documentation site. The original wiki will not receive further updates.
Thank you,
The Research Computing Team
S.A.G.E. - Statistical Analysis for Genetic Epidemiology contains programs for use in the genetic analysis of family, pedigree and individual data.
Note: This software is NOT the same as the SAGE listed below!
Make sure that every publication which presents results from using S.A.G.E. carries an appropriate acknowledgement such as: '(Some of) The results of this paper were obtained by using the program package S.A.G.E., which is supported by a U.S. Public Health Service Resource Grant (1 P41 RR03655) from the National Center for Research Resources' - (it is important that the grant numbers appear under 'acknowledgments'). Send bibliographic information about every paper in which S.A.G.E. is used (author(s), title, journal, volume and page numbers; a reprint will do provided it has the necessary information on it) to: R.C. Elston Department of Epidemiology and Biostatistics Case Western Reserve University Wolstein Research Building 2103 Cornell Road Cleveland, Ohio 44106-7281 The recommended way of referencing the S.A.G.E. programs is as follows: S.A.G.E. [2009]. Statistical Analysis for Genetic Epidemiology 6.0 Computer program package available from the Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland.
Demo data files are available under /share/apps/s.a.g.e./SAGE_6.0.0_Linux64/demo/data_files
To load the S.A.G.E. environment, use
module load s.a.g.e./sage-6.0