NgsCctsBuildVelvet: Difference between revisions

From Cheaha
Jump to navigation Jump to search
(Created page with " TARGET_VER=velvet_1.2.08 wget http://www.ebi.ac.uk/~zerbino/velvet/${TARGET_VER}.tgz tar xzvf ${TARGET_VER}.tgz rm ${TARGET_VER}.tgz cd ${TARGET_VER} Edit Makefile to c...")
(No difference)

Revision as of 21:03, 9 October 2012

TARGET_VER=velvet_1.2.08
wget http://www.ebi.ac.uk/~zerbino/velvet/${TARGET_VER}.tgz
tar xzvf ${TARGET_VER}.tgz
rm ${TARGET_VER}.tgz
cd ${TARGET_VER}

Edit Makefile to change max k mer available

vi Makefile
/MAXKMER
$bcw57
LONGSEQUENCES=true
:wq

Build

make

done