Neuroimaging technical issues club: Difference between revisions

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Tentative Schedule for meetings   
Tentative Schedule for meetings   
* June 17: Dr. Visscher will present on the GLM  
* June 17: Dr. Visscher will present on the GLM  
* July 15th:  open for volunteers/ suggestions
* July 15th:  Cheaha cluster computing and Matlab- presented by John-Paul Robinson
* July 29: open for volunteers/ suggestions
* July 29: Rudolphe will present on ICA
* August 5: open for volunteers/ suggestions
** Link of a wiki that describes the topic as it relates to neuroimaging: http://neuro.imm.dtu.dk/wiki/Functional_neuroimaging_independent_component_analysis 
* Aug 19: open for volunteers/ suggestions




List of topics to discuss
* August 5:  open
* ICA theory and application:  Rudolphe from Dr. Visscher's lab has expressed interest in presenting on this and leading a discussion. 
* Aug 19: open
* SPM, AFNI, FSL: What are their assumptions/ models. This could be a compare/ contrast discussion/ presentation.   
* Sept. 2: Jacquelynn Copeland:  Freesurfer for structural data
* Artifacts:  Being able to detect and repair artifacts.
 
** Artifact repair programs that could be covered: ArtRepair/ ROIMOD
 
List of topics to discuss in future:
* machine learning to do classification 
* Using virtual machines on a server
* Power analysis:   
* Power analysis:   
* Scrpting logic  
* Scrpting logic:  Matlab and Bash script
* Structural MRI: VBM, Freesurfer, and painful hand segmention (GOD rest your Soul Jennifer Hadley)
* Structural MRI: VBM, Freesurfer (Dr. Taub Group??)

Latest revision as of 18:31, 26 July 2011

Neuroimaging.jpg


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Tentative Schedule for meetings


  • August 5: open
  • Aug 19: open
  • Sept. 2: Jacquelynn Copeland: Freesurfer for structural data


List of topics to discuss in future:

  • machine learning to do classification
  • Using virtual machines on a server
  • Power analysis:
  • Scrpting logic: Matlab and Bash script
  • Structural MRI: VBM, Freesurfer (Dr. Taub Group??)
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