SHRiMP

SHRiMPis a software package for aligning genomic reads against a target genome. It was primarily developed with the multitudinous short reads of next generation sequencing machines in mind, as well as Applied Biosystem's colourspace genomic representation.

Project website: http://compbio.cs.toronto.edu/shrimp/

Load SGE module
The following Modules files should be loaded for this package: module load shrimp/shrimp-1.3