Varianttools

variant tools is a software tool for the annotation, selection, and analysis of variants in the context of next-gen sequencing analysis. This tool is designed around the manipulation of variant tables that simplify the tracking of variants (SNV, insertion, deletion, and other complex types) and the samples that they were detected in.

Project website: http://varianttools.sourceforge.net/Main/HomePage

Load SGE module
The following Modules files should be loaded for this package: module load varianttools/vtools-1.0.1b_patched