SOLAR

SOLAR: Sequential Oligogenic Linkage Analysis Routines

SOLARis an extensive, flexible software package for genetic variance components analysis, including linkage analysis, quantitative genetic analysis, SNP association analysis (QTN and QTLD), and covariate screening. Operations are included for calculation of marker-specific or multipoint identity-by-descent (IBD) matrices in pedigrees of arbitrary size and complexity, and for linkage analysis of multiple quantitative traits and/or discrete traits which may involve multiple loci (oligogenic analysis), dominance effects, household effects, and interactions.

Project website: http://www.txbiomed.org/departments/genetics/genetics-detail?p=37

Load SGE module
The following Modules files should be loaded for this package: module load solar/solar-4.3.1