Maq

Maq is a software that builds mapping assemblies from short reads generated by the next-generation sequencing machines. It is particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has preliminary functions to handle ABI SOLiD data.

Project website: http://maq.sourceforge.net/maq-man.shtml

Load SGE module
The following Modules files should be loaded for this package: module load maq/maq-0.7