NgsCctsGeneWise

NgsCcts back to top

Needed for VICUNA package NgsCctsVicuna

= Download and build =

cd /share/apps/ngs-ccts wget -O - ftp://ftp.ebi.ac.uk/pub/software/unix/wise2/wise2.2.0.tar.gz | tar xzvf - cd wise2.2.0/src make all make test cd .. ln -s src/bin. export WISECONFIGDIR=/share/apps/ngs-ccts/wise2.2.0/wisecfg/ bin/genewise test_data/road.pep test_data/human.genomic
 * 1) get and unpack
 * 1) more test

= Env Vars CORRECTED =

You must set your WISECONFIGDIR to the config directory before using the programs

export WISECONFIGDIR=/share/apps/ngs-ccts/wise2.2.0/wisecfg/