NgsCctsVcflib

= Overview =

https://github.com/ekg/vcflib

this project does not have release or tags.

It was originally installed to have access to the vcfallelicprimitives referenced in (Zook et al 2014) "Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls" http://www.nature.com/nbt/journal/vaop/ncurrent/full/nbt.2835.html

= Version 20140224 =

To use
module load ngs-ccts/vcflib/20140224

Build details
mkdir -p /share/apps/ngs-ccts/vcflib/20140224
 * 1) setup

git clone --recursive git://github.com/ekg/vcflib.git
 * 1) get latest code


 * 1) build

module load gcc/4.8.1 cd vcflib make
 * 1) get latest gcc (older, default version failed to compile in fsom/ -see

mkdir /share/apps/ngs-ccts/modulefiles/vcflib vi /share/apps/ngs-ccts/modulefiles/vcflib/20142024
 * 1) create module file
 * 2) it adds $VER_DIR/vcflib/bin to PATH