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This special page shows all uploaded files. When filtered by user, only files where that user uploaded the most recent version of the file are shown.

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descDate Name Thumbnail Size User Description Versions
01:17, 16 September 2011Fastqc summary.jpg (file)31 KBOzborn@uab.edu 1
16:50, 15 September 2011SNPEffResultTabular.jpg (file)18 KBOzborn@uab.edu 1
16:36, 15 September 2011CMV21950RvsVACWR CompareData.jpg (file)20 KBOzborn@uab.edu 1
16:14, 15 September 2011GalaxyTutorialSharedLibrary.jpg (file)44 KBOzborn@uab.edu 1
15:06, 15 September 2011SamBamFileFormatFlags.jpg (file)42 KBOzborn@uab.edu (SAM format flags)1
14:40, 15 September 2011FastQTrimmerRun.jpg (file)23 KBOzborn@uab.edu (CMV 21950R being trimmed from 3')1
14:25, 15 September 2011DrawQualityScoreBoxplot.jpg (file)10 KBOzborn@uab.edu (Run box plot)2
14:21, 15 September 2011QualityStatsResults.jpg (file)27 KBOzborn@uab.edu 1
14:17, 15 September 2011RunComputeQualityStats.jpg (file)9 KBOzborn@uab.edu 1
13:47, 15 September 2011FastQCRunSettings.jpg (file)22 KBOzborn@uab.edu 1
13:08, 15 September 2011DataLibraryVacWRFastQ.jpg (file)56 KBOzborn@uab.edu 1
10:55, 15 September 2011PileupFiltering100Reads.jpg (file)45 KBOzborn@uab.edu (Pileup run settings for Vaccinia WR)1
00:11, 15 September 2011FilterRunVacWR.jpg (file)13 KBOzborn@uab.edu (How to filter a SAM file for SNPs versus reference)1
23:21, 14 September 2011SNPEffResults.jpg (file)16 KBOzborn@uab.edu (SNP Results for Vaccinia WR)1
23:18, 14 September 2011SNPEffCoverage.jpg (file)69 KBOzborn@uab.edu (For a vaccinia WR)1
22:45, 14 September 2011SNPEff.jpg (file)54 KBOzborn@uab.edu (SNPEff run settings)1
22:08, 14 September 2011GeneratePileup.jpg (file)56 KBOzborn@uab.edu (Generate pileup for Vaccinia, call consensus)1
17:35, 14 September 2011Sam2bam.jpg (file)12 KBOzborn@uab.edu (Conversion of SAM file to BAM)1
17:35, 14 September 2011Flagstat.jpg (file)14 KBOzborn@uab.edu (Flag stat on BAM files)1
16:52, 14 September 2011Bwa run cmv 227r.jpg (file)52 KBOzborn@uab.edu (BWA run of VAC WR CMV 227R)1
16:33, 14 September 2011Bwa run cmv 21950r.jpg (file)49 KBOzborn@uab.edu (Running BWA on CMV 21950R in UAB Galaxy)1
16:08, 14 September 2011Cmv21950r 3 1 original boxplot.jpg (file)60 KBOzborn@uab.edu 2
15:58, 14 September 2011Cmv21950r 3 1 trimmed boxplot.jpg (file)58 KBOzborn@uab.edu (CMV 21950R after trimming one base off the end.)1
15:25, 14 September 2011ComputeQualityStatsCMV21950R 3 1.jpg (file)86 KBOzborn@uab.edu (Image of running computation of quality stats)1
17:31, 13 September 2011CMV VAC WR 3 2 base quality.jpg (file)57 KBOzborn@uab.edu (CMV_VAC_WR_3_2 box and whiskers plot from FastQC)1
16:31, 13 September 2011DataType.jpg (file)49 KBOzborn@uab.edu (Data attributes for a vaccinia virus fastq file from the history pane.)1
16:26, 13 September 2011HistoryPane.jpg (file)25 KBOzborn@uab.edu (What your history pane should look like after linking in the data.)1
12:51, 13 September 2011UploadLinkDataFilesGUI.jpg (file)98 KBOzborn@uab.edu (Picture of linking in directory of files to use in Galaxy)1