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Structure

From UABgrid Documentation

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Latest revision as of 10:40, 4 April 2012

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Structure is software for using multi-locus genotype data to investigate population structure. Its uses include inferring the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including SNPS, microsatellites, RFLPs and AFLPs.

Project website: http://pritch.bsd.uchicago.edu/structure.html

[edit] Load SGE module

The following Modules files should be loaded for this package:

module load structure/structure-2.2