User contributions

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• 15:14, 15 September 2011 (diff | hist) . . (+41)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Pileup)
• 15:14, 15 September 2011 (diff | hist) . . (0)‎ . . N File:GalaxyTutorialSharedLibrary.jpg ‎ (top)
• 15:13, 15 September 2011 (diff | hist) . . (+209)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Pileup)
• 14:56, 15 September 2011 (diff | hist) . . (+26)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Pileup)
• 14:56, 15 September 2011 (diff | hist) . . (+44)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎BAM Conversion)
• 14:54, 15 September 2011 (diff | hist) . . (+573)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎BAM Conversion)
• 14:44, 15 September 2011 (diff | hist) . . (+285)‎ . . Galaxy DNA-Seq Tutorial ‎
• 14:32, 15 September 2011 (diff | hist) . . (+106)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Other Variant Detection Approaches)
• 14:28, 15 September 2011 (diff | hist) . . (-2)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Samtools)
• 14:28, 15 September 2011 (diff | hist) . . (+116)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Variant Analysis)
• 14:09, 15 September 2011 (diff | hist) . . (+75)‎ . . Galaxy DNA-Seq Tutorial ‎
• 14:06, 15 September 2011 (diff | hist) . . (+16)‎ . . N File:SamBamFileFormatFlags.jpg ‎ (SAM format flags) (top)
• 14:02, 15 September 2011 (diff | hist) . . (+45)‎ . . Galaxy DNA-Seq Tutorial ‎
• 13:56, 15 September 2011 (diff | hist) . . (+153)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎BAM Conversion)
• 13:51, 15 September 2011 (diff | hist) . . (+237)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Short read alignment to reference genome using BWA)
• 13:46, 15 September 2011 (diff | hist) . . (+152)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Results)
• 13:43, 15 September 2011 (diff | hist) . . (+262)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Performing cleanup)
• 13:40, 15 September 2011 (diff | hist) . . (+32)‎ . . N File:FastQTrimmerRun.jpg ‎ (CMV 21950R being trimmed from 3') (top)
• 13:31, 15 September 2011 (diff | hist) . . (+226)‎ . . Galaxy DNA-Seq Tutorial ‎
• 13:27, 15 September 2011 (diff | hist) . . (+88)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Quality Statistics and Boxplot)
• 13:25, 15 September 2011 (diff | hist) . . (0)‎ . . File:DrawQualityScoreBoxplot.jpg ‎ (uploaded a new version of "File:DrawQualityScoreBoxplot.jpg": Run box plot) (top)
• 13:22, 15 September 2011 (diff | hist) . . (+35)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Quality Statistics and Boxplot)
• 13:21, 15 September 2011 (diff | hist) . . (0)‎ . . N File:QualityStatsResults.jpg ‎ (top)
• 13:18, 15 September 2011 (diff | hist) . . (-10)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Quality Statistics and Boxplot)
• 13:17, 15 September 2011 (diff | hist) . . (0)‎ . . N File:RunComputeQualityStats.jpg ‎ (top)
• 13:14, 15 September 2011 (diff | hist) . . (+30)‎ . . Galaxy DNA-Seq Tutorial ‎
• 13:11, 15 September 2011 (diff | hist) . . (+98)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Reference Genome)
• 13:09, 15 September 2011 (diff | hist) . . (+114)‎ . . Galaxy DNA-Seq Tutorial ‎
• 13:04, 15 September 2011 (diff | hist) . . (+465)‎ . . Galaxy DNA-Seq Tutorial ‎ (FastQC and Compute stats cleanup)
• 12:47, 15 September 2011 (diff | hist) . . (0)‎ . . N File:FastQCRunSettings.jpg ‎ (top)
• 12:39, 15 September 2011 (diff | hist) . . (+127)‎ . . Galaxy DNA-Seq Tutorial ‎
• 12:32, 15 September 2011 (diff | hist) . . (+115)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Reference Genome)
• 12:30, 15 September 2011 (diff | hist) . . (+217)‎ . . Galaxy ‎ (→‎Available datasets: Added new datasets)
• 12:21, 15 September 2011 (diff | hist) . . (+368)‎ . . Galaxy DNA-Seq Tutorial ‎
• 12:09, 15 September 2011 (diff | hist) . . (+66)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Linking to data)
• 12:08, 15 September 2011 (diff | hist) . . (0)‎ . . N File:DataLibraryVacWRFastQ.jpg ‎ (top)
• 09:56, 15 September 2011 (diff | hist) . . (+38)‎ . . Galaxy DNA-Seq Tutorial ‎ (Pileup filtering)
• 09:55, 15 September 2011 (diff | hist) . . (+35)‎ . . N File:PileupFiltering100Reads.jpg ‎ (Pileup run settings for Vaccinia WR) (top)
• 23:13, 14 September 2011 (diff | hist) . . (+75)‎ . . Galaxy DNA-Seq Tutorial ‎ (Filtering SNPs)
• 23:11, 14 September 2011 (diff | hist) . . (+50)‎ . . N File:FilterRunVacWR.jpg ‎ (How to filter a SAM file for SNPs versus reference) (top)
• 22:22, 14 September 2011 (diff | hist) . . (+32)‎ . . Galaxy DNA-Seq Tutorial ‎
• 22:21, 14 September 2011 (diff | hist) . . (+27)‎ . . N File:SNPEffResults.jpg ‎ (SNP Results for Vaccinia WR) (top)
• 22:20, 14 September 2011 (diff | hist) . . (+141)‎ . . Galaxy DNA-Seq Tutorial ‎
• 22:18, 14 September 2011 (diff | hist) . . (+17)‎ . . N File:SNPEffCoverage.jpg ‎ (For a vaccinia WR) (top)
• 22:17, 14 September 2011 (diff | hist) . . (+214)‎ . . Galaxy DNA-Seq Tutorial ‎ (SNPEff separate section)
• 21:47, 14 September 2011 (diff | hist) . . (+78)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Variant Analysis)
• 21:45, 14 September 2011 (diff | hist) . . (+19)‎ . . N File:SNPEff.jpg ‎ (SNPEff run settings) (top)
• 21:38, 14 September 2011 (diff | hist) . . (+127)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎BAM Conversion)
• 21:34, 14 September 2011 (diff | hist) . . (+153)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Variant Analysis)
• 21:09, 14 September 2011 (diff | hist) . . (+107)‎ . . Galaxy DNA-Seq Tutorial ‎ (→‎Variant Analysis)

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