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Maq

From UABgrid Documentation

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Latest revision as of 10:17, 4 April 2012

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Maq is a software that builds mapping assemblies from short reads generated by the next-generation sequencing machines. It is particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has preliminary functions to handle ABI SOLiD data.

Project website: http://maq.sourceforge.net/maq-man.shtml

[edit] Load SGE module

The following Modules files should be loaded for this package:

module load maq/maq-0.7