Personal tools


From UABgrid Documentation

(Difference between revisions)
Jump to: navigation, search
(add latest version info and download link for fsl)
(added category software)
Line 19: Line 19:
module load fsl/fsl-4.1.6
module load fsl/fsl-4.1.6

Revision as of 08:59, 4 April 2012



FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. FSL is written mainly by members of the Analysis Group, FMRIB, Oxford, UK.

The latest version of FSL available is 4.1.6. The last update to this software was in 2008.

FSL on Cheaha

FSL-4.1.6 is installed on Cheaha. module command can be used to find out the current installed version. For FSL, use

module whatis fsl

Environment Setup

Before running any FSL applications like bedpostx, set up the necessary environment with the following command:

module load fsl/fsl-4.1.6